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The Birmingham Metabolite Library is a collection of 3328 experimental 1D and 2D J-resolved NMR spectra of 208 metabolite standards. Established by University of Birmingham researchers and funded by the BBSRC
The BML contains raw data (FIDs), 1D and 2D spectra, and quantified peak lists, alongside metadata compliant with the Metabolomics Standards Initiative endorsed reporting requirements1. All data in the library is made freely available to the scientific community. However, it requests that use of the library is acknowledged by reference to: C. Ludwig, J.M. Easton, A. Lodi, S. Tiziani, S. Manzoor, A.D. Southam, J.J. Byrne, L.M. Bishop, S. He, T.N. Arvanitis, U.L. Günther, and M.R. Viant. Birmingham Metabolite Library: A publicly accessible database of 1-D 1H and 2-D 1H J-resolved NMR spectra of authentic metabolite standards (BML-NMR). Metabolomics 8(1), 8-18 (2012).
The library also forms the core of a data mining algorithm for the automated identification and quantification of metabolites in 2D J-resolved datasets available for registered users of the site
J-resolved NMR spectra should be submitted to the BML-NMR for identification as described here. Once the identification job has completed the resulting dataset can be downloaded from the site as a .zip file. To import the data into Pathomx simply load this zip file directly through this plugin. Metabolite names and quantities will be shown on the Table view.